PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MDP0000528857
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Malus
Family NAC
Protein Properties Length: 275aa    MW: 30241.3 Da    PI: 5.1678
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MDP0000528857genomeGDRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM32.32.8e-10281573128
            NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikev...diykvePwdLp.k..kvkaeekewyfFskrdkkyatgkrknr.atksgyWkatgkdke 91 
                     G++F+P+ + l+ +yL +k+ gk+l++ e+ik++   + +  +P  +p +  ++ +e+++ +fF++   ++a  + + r +++ ++W+ + + k+
  MDP0000528857  28 WGLEFEPKPDSLLIYYLFNKLIGKPLPTVEMIKHLvsgKKNFPDPTFIPpEnfSFGSEKNKAFFFVPFVDEEA--DSSLRfTVRGSFWRFSSE-KS 120
                    599**********************9988888877432333447888875434566677799****9988765..456664677889996554.44 PP

            NAM  92 vlsk...kgelvglkktLvfykgrapkgektdWvmheyrl 128
                    + +    ++  +g+ +t++f+k+ +++g      m ey+l
  MDP0000528857 121 INHLhngEEVRIGTARTFIFFKNIQEEG---GYEMVEYKL 157
                    44433346667**********8777764...677777765 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.07926177IPR003441NAC domain
SuperFamilySSF1019418.89E-827162IPR003441NAC domain
PfamPF023658.7E-729157IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MAVSSDFNML EKALSVQEFY TAADLEMWGL EFEPKPDSLL IYYLFNKLIG KPLPTVEMIK  60
HLVSGKKNFP DPTFIPPENF SFGSEKNKAF FFVPFVDEEA DSSLRFTVRG SFWRFSSEKS  120
INHLHNGEEV RIGTARTFIF FKNIQEEGGY EMVEYKLLNS KALGIDPRLI XSRSFNDLLQ  180
LYSIVAITCH DGNLEKIKKG IVAPALLTGG GHQIILPPDA DIGAKXSIAP LIDHISXNPD  240
SXAPSPAPQL GLFGLETVSX LARTTGAAGE ASTS*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008359188.10.0PREDICTED: uncharacterized protein LOC103422904 isoform X1